difference between numpy dot() and inner()

numpy.dot:

For 2-D arrays it is equivalent to matrix multiplication, and for 1-D arrays to inner product of vectors (without complex conjugation). For N dimensions it is a sum product over the last axis of a and the second-to-last of b:

numpy.inner:

Ordinary inner product of vectors for 1-D arrays (without complex conjugation), in higher dimensions a sum product over the last axes.

(Emphasis mine.)

As an example, consider this example with 2D arrays:

>>> a=np.array([[1,2],[3,4]])
>>> b=np.array([[11,12],[13,14]])
>>> np.dot(a,b)
array([[37, 40],
       [85, 92]])
>>> np.inner(a,b)
array([[35, 41],
       [81, 95]])

Thus, the one you should use is the one that gives the correct behaviour for your application.


Performance testing

(Note that I am testing only the 1D case, since that is the only situation where .dot and .inner give the same result.)

>>> import timeit
>>> setup = 'import numpy as np; a=np.random.random(1000); b = np.random.random(1000)'

>>> [timeit.timeit('np.dot(a,b)',setup,number=1000000) for _ in range(3)]
[2.6920320987701416, 2.676928997039795, 2.633111000061035]

>>> [timeit.timeit('np.inner(a,b)',setup,number=1000000) for _ in range(3)]
[2.588860034942627, 2.5845699310302734, 2.6556360721588135]

So maybe .inner is faster, but my machine is fairly loaded at the moment, so the timings are not consistent nor are they necessarily very accurate.

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