Detach (move) subdirectory into separate Git repository

The Easy Way™

It turns out that this is such a common and useful practice that the overlords of Git made it really easy, but you have to have a newer version of Git (>= 1.7.11 May 2012). See the appendix for how to install the latest Git. Also, there’s a real-world example in the walkthrough below.

  1. Prepare the old repo

     cd <big-repo>
     git subtree split -P <name-of-folder> -b <name-of-new-branch>

Note: <name-of-folder> must NOT contain leading or trailing characters. For instance, the folder named subproject MUST be passed as subproject, NOT ./subproject/

Note for Windows users: When your folder depth is > 1, <name-of-folder> must have *nix style folder separator (/). For instance, the folder named path1\path2\subproject MUST be passed as path1/path2/subproject

  1. Create the new repo

     mkdir ~/<new-repo> && cd ~/<new-repo>
     git init
     git pull </path/to/big-repo> <name-of-new-branch>
  2. Link the new repo to GitHub or wherever

     git remote add origin <>
     git push -u origin master
  3. Cleanup inside <big-repo>, if desired

     git rm -rf <name-of-folder>

Note: This leaves all the historical references in the repository. See the Appendix below if you’re actually concerned about having committed a password or you need to decreasing the file size of your .git folder.


These are the same steps as above, but following my exact steps for my repository instead of using <meta-named-things>.

Here’s a project I have for implementing JavaScript browser modules in node:

tree ~/node-browser-compat

├── ArrayBuffer
├── Audio
├── Blob
├── FormData
├── atob
├── btoa
├── location
└── navigator

I want to split out a single folder, btoa, into a separate Git repository

cd ~/node-browser-compat/
git subtree split -P btoa -b btoa-only

I now have a new branch, btoa-only, that only has commits for btoa and I want to create a new repository.

mkdir ~/btoa/ && cd ~/btoa/
git init
git pull ~/node-browser-compat btoa-only

Next, I create a new repo on GitHub or Bitbucket, or whatever and add it as the origin

git remote add origin
git push -u origin master

Happy day!

Note: If you created a repo with a, .gitignore and LICENSE, you will need to pull first:

git pull origin master
git push origin master

Lastly, I’ll want to remove the folder from the bigger repo

git rm -rf btoa


Latest Git on macOS

To get the latest version of Git using Homebrew:

brew install git

Latest Git on Ubuntu

sudo apt-get update
sudo apt-get install git
git --version

If that doesn’t work (you have a very old version of Ubuntu), try

sudo add-apt-repository ppa:git-core/ppa
sudo apt-get update
sudo apt-get install git

If that still doesn’t work, try

sudo chmod +x /usr/share/doc/git/contrib/subtree/
sudo ln -s \
/usr/share/doc/git/contrib/subtree/ \

Thanks to rui.araujo from the comments.

Clearing your history

By default removing files from Git doesn’t actually remove them, it just commits that they aren’t there anymore. If you want to actually remove the historical references (i.e. you committed a password), you need to do this:

git filter-branch --prune-empty --tree-filter 'rm -rf <name-of-folder>' HEAD

After that, you can check that your file or folder no longer shows up in the Git history at all

git log -- <name-of-folder> # should show nothing

However, you can’t “push” deletes to GitHub and the like. If you try, you’ll get an error and you’ll have to git pull before you can git push – and then you’re back to having everything in your history.

So if you want to delete history from the “origin” – meaning to delete it from GitHub, Bitbucket, etc – you’ll need to delete the repo and re-push a pruned copy of the repo. But wait – there’s more! – if you’re really concerned about getting rid of a password or something like that you’ll need to prune the backup (see below).

Making .git smaller

The aforementioned delete history command still leaves behind a bunch of backup files – because Git is all too kind in helping you to not ruin your repo by accident. It will eventually delete orphaned files over the days and months, but it leaves them there for a while in case you realize that you accidentally deleted something you didn’t want to.

So if you really want to empty the trash to reduce the clone size of a repo immediately you have to do all of this really weird stuff:

rm -rf .git/refs/original/ && \
git reflog expire --all && \
git gc --aggressive --prune=now

git reflog expire --all --expire-unreachable=0
git repack -A -d
git prune

That said, I’d recommend not performing these steps unless you know that you need to – just in case you did prune the wrong subdirectory, y’know? The backup files shouldn’t get cloned when you push the repo, they’ll just be in your local copy.


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