I found this useful:
http://blog.ablepear.com/2012/10/bundling-python-files-into-stand-alone.html
In short, you can .zip your modules and include a __main__.py file inside, which will enable you to run it like so:
python3 app.zip
Since my app is small I made a link from my main script to __main__.py.
Addendum:
You can also make the zip self-executable on UNIX-like systems by adding a single line at the top of the file. This may be important for scripts using Python3.
echo '#!/usr/bin/env python3' | cat - app.zip > app
chmod a+x app
Which can now be executed without specifying python
./app